http://www.mesialonline.com/Allegiance/cortSE/cortSE.html
UI mods increase the amount of chat lines which should help with being able to keep track of drone orders when on command wing.
I don't think you can filter your chat to only display orders.
Target prioritization is the main part of effective whoring. It's incredibly situational and will depend greatly on what your team is currently doing, what your own abilities are, and what your potential targets abilities are.
For example I won't generally prioritize killing babelfish in most situations because I know he's going to boost away and just waste my time. You have to be quick to change targets when you know someone is just going to draw fire while they boost away. A lot of times I go for the target that I know will be easiest to kill so I can raise my KB before engaging something more difficult. But other times you'll want to go after what you know is the biggest threat. It really depends on the situation.
Bases with 2 red doors will alternate where is launches people (the first person to launch will launch on one side, and the next person to launch will launch from the other side) this is important to know if you're trying to launch a bomber from the appropriate door, or for camping a base.
Not sure about teleports.
I imagine you can find miner hull/shield strength using ICE. (just did)
You can modify many files as long as they are not protected by ASGS (some files are protected to prevent cheating)
I play widescreen "hd" Alleg and it doesn't look out of the ordinary
There's a new sheriff in town.